Bioinformatics Centre
College of Veterinary Science, Assam Agricultural University, Guwahati-781022, India
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             An MPGT code consists of four blocks of binary numbers, corresponding to the four multiplexes used in this identification scheme (M1-M2-M3-M4). Each digit corresponds to a gene in these multiplxes, sorted in descending size of expected amplicon. A successful PCR product is indicated by digit "1", a failure to amplify by a "0"(except for the internal control, Salmonella specific gene STM1608, not included in the code).

SerotypeMPGT CodesO GroupO AntigenH Antigen Phase 1H Antigen Phase 2Others
Experimentally Confirmedin-silico Derived
3,10:e,h:-00000-0110-011-001
4,[5],12:i:-11010-0110-011-101
6,7:k:-00000-0100-111-001
S. bongori00000-0110-001-000
11001-0110-000-000
00000-0000-000-000
Abony11000-0100-100-001O:4 (B)1,4,[5],12,27be,n,x
Abortusovis01000-0101-101-10001000-0100-101-100O:4(B)4,12c1,6
Adelaide00000-0100-000-001O:35(B)35f,g-[z27]
Agona01000-0100-001-001O:4(B)1,4,[5],12f,g,s[1,2][z27],[z45]
Alachua00000-0100-011-101
00010-0100-010-001
O:35(O)35z4,z23-[z37],[z45]
Albany00000-0100-011-001O:8(C2-C3)8,20z4,z24-[z45]
Anatum00000-0110-111-001O:3,10(E1)3,{10},{15},{15,34}e,h1,6[z64]
Anatum var. O 15+ (Newington)00000-0110-111-001
Anatum var. O 15+,34+ (Minneapolis)00000-0110-111-001
Aqua00000-0110-110-101O:30(N)30k1,6
Arizonae00000-0100-011-000
10000-0100-011-000
Baildon00001-0110-100-001O:9,46(D2)9,46a1,2
Bardo00000-0110-111-001O:8(C2-C3)8e,h1,2
Berta01001-0100-011-101O:9(D1)1,9,12[f],g,[t]-
Blockley01000-0110-110-001O:8(C2-C3)6,8k1,5[z58]
Bovismorbificans01000-0100-011-001O:8(C2-C3)6,8,20r,[i]1,5[R1.....]
Braenderup
01011-0111-110-111
01000-0100-110-001O:7(C1),6,7,14,e,h,e,n,z15,
Brandenburg00000-0110-000-001O:4(B)4,[5],12l,ve,n,z15
Bredeney00100-0110-010-001O:4(B)1,4,12,27l,v1,7[z40]
Cerro00000-0100-000-001
11000-0100-011-001
O:18(K)6,14,18z4,z23[1,5][z45],[z82]
Choleraesuis01000-0101-110-00101000-0100-110-001O:7 (C1)6,7c1,5
Cubana00000-0100-011-001O:13(G)1,13,23z29-[z37].[z43]
Derby00000-0110-011-101O:4(B)1,4,[5],12f,g[1,2]
Diarizonae00000-0110-100-000
00001-0110-100-100
00000-0110-000-000
Dublin00001-0100-011-101
01001-0111-111-101
O:9 (D1),1,9,12,[Vi]g,p,
Enteritidis00001-1100-011-10100001-0100-010-001
00001-0100-010-101
00011-0100-011-001
O:9 (D1)[1],9,12g,m
Fresno00001-0100-011-001O:9,46(D2)9,46z38-
Gallinarum00000-0110-101-00100001-0100-011-101O:9 (D1)1,9,12--
Gallinarum var. Pullorum00001-0110-010-101
00001-0100-010-101
1,9,12
Gaminara00100-0100-010-001O:16 (I)16d1,7
Give00000-0110-010-001O:3,10(E1)3,{10},{15},{15.34}l,v1,7[d],[z27]
Give var. O 15+ (Newbrunswick)00100-0110-010-001
Hadar01000-0100-111-001O:8(C2-C3)6,8z10e,n,x
Hartford01000-0100-110-001O:7(C1)6,7ye,n,x[z67]
Havana00000-0100-001-001O:13(G)1,13,23f,g,[s]-[z79]
Heidelberg11000-0110-111-111
01000-0100-110-101
11000-0110-110-111O:4 (B)1,4,[5],12r1,2
Houtenae01000-1100-010-000
10000-0110-010-100
00000-0110-000-000
Hvittingfoss00000-0100-111-001O:16(I)16be,n,x
Idikan00001-0101-111-001O:13 (G)1,3,23i1,5
Indica00000-0100-110-000
00000-0100-110-101
Infantis00000-0100-100-01100000-0100-110-001
00010-0100-110-011
O:7 (C1)6,7,14r1,5[R1....],[z37],[z45],[z49]
Inverness00000-0110-110-101O:38 (P)38k1,6
Javiana00001-0110-100-001O:9 (D1)1,9,121,z281,5[R1....]
Johannesburg00000-0110-110-000O:40 (R)1,40be,n,x
Kentucky00000-0100-010-011
01000-0101-111-001
01000-0100-111-001O:8 (C2-C3)8,20iz6
Kiambu00000-0100-100-001O:4 (B)1,4,12z1,5
Kintambo00000-0110-010-001
01100-0100-001-001
O:13 (G)1,13,23m,t-
Krefeld01000-0110-111-011O:1,3,19 (E4)1,3,19yl,w
Lille00000-0100-011-101O:7 (C1)6,7,14z38-[z82]
Litchfield
11001-0110-111-001
00000-0110-111-001O:8 (C2-C3)6,8l,v1,2
Livingstone00000-0100-100-001O:7 (C1)6,7,14dl,w
London00000-0110-110-001O:3,10 (E1)3,{10},{15}l,v1,6
Manhattan01000-0110-100-001O:8 (C2-C3)6,8d1,5[z58]
Mbandaka00000-0100-111-101O:7 (C1)6,7,14z10e,n,z15[z37],[z45]
Meleagridis01000-0110-110-001O:3,10 (E1)3,{10},{15},{15,34}e,hl,w
Miami00001-0100-110-100
00101-0110-100-001
O:9 (D1)1,9,12a1,5
Minnesota00000-0110-110-001O:21 (L)21be,n,x[z33],[z49]
Mississippi00100-0110-110-000O:13 (G)1,13,23b1,5
Montevideo00000-0100-010-001
00000-0110-110-000
00010-0100-010-000
00110-0100-010-000
00110-0100-010-001
O:546,7,14,54g,m,s-
Muenchen00000-0100-111-001
01000-0110-110-001
O:8 (C2-C3)6,8d1,2[z67]
Muenster00000-0110-110-011O:3,10 (E1)3,{10},{15},{15,34}e,h1,5[z48]
Newport00001-0110-111-00100000-0110-111-001
01000-0110-111-001
O:8(C2-C3)6,8,[20]e,h1,2[z67],[z78]
Nitra00001-1100-011-101O:2 (A)2,12g,m-
Ohio00000-0100-110-001O:7 (C1)6,7,14bl,w[z59]
Oranienburg11000-0100-011-001O:7 (C1)6,7,14m,t[z57]
Orion00010-0110-100-000O:3,10 (E1)3,{10},{15},{15,34}y1,5
Orion var. O 15+ (Binza)00010-0110-100-000
Ouakam00001-0100-011-001O:9,46(D2)9,46z29-[z45]
Panama00001-0110-110-001O:9 (D1)1,9,12l,v1,5[R1.....]
Paratyphi A10101-0111-100-010
00101-1101-011-101
00101-0110-100-010O:2 (A)1,2,12a[1,5]
Paratyphi B11000-0110-110-00101000-0110-010-001
01100-0100-010-001
11000-0100-100-101
O:4 (B)1,4,[5],12b1,2[z5],[z33]
Paratyphi C01000-0101-110-001
01000-0101-110-000
01000-0100-110-001O:7 (C1)6,7,[Vi]c1,5
Poano00000-0100-100-001
00100-0100-100-001
O:6,14 (H)[1],6,14,[25]zl,z13,z28
Pomona00100-0100-110-000O:28 (M)28y1,7[z80],[z90]
Poona00100-0110-100-011O:13 (G)1,13,22z1,6[z44],[z59]
Putten00000-0100-110-001O:13 (G)13,23dl,w
Reading11000-0110-110-101O:4(B)1,4,[5],12e,h1,5[R1......]
Rissen11000-0100-011-001O:7 (C1)6,7,14f,g-
Rubislaw00000-0110-100-001O:11 (F)11re,n,x
Salamae00000-0110-110-000
00011-0110-110-000
San Diego00000-0110-000-011
Schwarzengrund00000-0110-110-00100000-0110-010-001O:4 (B)1,4,12,27d1,7
Sendai00101-0110-100-010O:9 (D1)1,9,12a1,5
Senftenberg01110-0110-001-001
10100-0110-011-001
O:1,3,19 (E4)1,3,19g,[s],t-[z27],[z34],[z37],[z43],[z45],[z46],[z82]
Stanley01000-0110-110-101O:4 (B)1,4,[5],12,27d1,2
Tennessee01100-0100-011-001O:7 (C1)6,7,14z29[1,2,7]
Thompson00000-0100-111-001O:7 (C1)6,7,14k1,5[R1.....]
Typhi11101-0111-000-010
01101-0111-000-010
01001-0111-000-010O:9 (D1)9,12,[Vi]d-[z66]
Typhimurium11010-0110-111-101
11010-0110-111-001
O:4 (B)1,4,[5],12i1,2
Typhimurium var. O 5 - (Copenhagen)11010-0110-111-101
Uganda01000-0110-000-011O;3,10 (E1)3,{10},{15}l,z131,5
Uganda var. O 15+ (Kinshasa)01000-0110-000-011
Urbana00000-0110-110-000O:30 (N)30be,n,x
Vellore00000-0110-100-101O:4 (B1,4,12,27z10z35
Virchow01000-0110-101-001O:7 (C1)6,7,14r1,2
Vridi00101-0100-000-001O:13 (G)1,13,23e,hl,w
Wandsworth01000-0110-001-001O:39(Q)39b1,2
Weltevreden00110-0110-110-001
10110-0111-110-001
00110-0110-110-001O:3,10 (E1)3,{10},{15}rz6
Worthington00100-0111-011-001O:13 (G)1,13,23zl,w[z43]

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